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Deep Learning for Protein Structure Prediction with AlphaFold 3.1 and Rosetta 4.2: A Comparative Study on Accuracy and Computational Efficiency
Comparing the performance of AlphaFold 3.1 and Rosetta 4.2 for protein structure prediction, we found that AlphaFold 3.1 is more accurate and computationally efficient, but both methods have limitations that need to be addressed in future research.
Jan 19, 2026
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